List Entries in Conferences and Workshops

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Listing 178 entries

[acmonr91]
Allen D. Malony, Daniel A. Reed, "Models for Performance Perturbation Analysis," Workshop on Parallel and Distributed Debugging, Proc. 1991 ACM/ ONR workshop on Parallel and Distributed Debugging, pp. 15-25, 1991
Keywords: performance perturbation, performance measurement

[aina07]
iawei Rong, Dejing Dou, Gwen A. Frishkoff, Robert M. Frank, Allen D. Malony, Don M. Tucker: A Semi-Automatic Framework for Mining ERP Patterns. AINA Workshops (1) 2007: 329-334
Keywords:

[bmei08]
Sergei Turovets, Pieter Poolman, Adnan Salman, Allen D. Malony, Don M. Tucker: Conductivity Analysis for High-Resolution EEG. BMEI (2) 2008: 386-393
Keywords:

[chasm_lacsi01]
C. Rasmussen, K. Lindlan, B. Mohr, J. Striegnitz, "CHASM: Static Analysis and Automatic Code Generation for Improved Fortran90 and C++ Interoperability," Proceedings of LACSI Symposium, 2001.
Keywords: CHASM, PDT, SILOON, F90, C++ interoperability

[cluster03]
H. Brunst, W. E. Nagel, and A. D. Malony, "A Distributed Performance Analysis Architecture for Clusters," In Proc. IEEE International Conference on Cluster Computing (Cluster 2003), IEEE Computer Society, pp. 73-83, Dec. 2003.
Keywords: Parallel Computing, Performance Analysis, Profiling, Tracing, Clusters, VNG, Vampir

[cluster06]
A. Nataraj, A. Malony, S. Shende, A. Morris, "Kernel-Level Measurement for Integrated Parallel Performance Views: the KTAU Project," In Proc. Cluster 2006, IEEE Computer Society, 2006.
Keywords: kernel mesurment, KTAU, TAU

[cluster16]
Bari, Md Abdullah Shahneous, et al. "ARCS: Adaptive Runtime Configuration Selection for Power-Constrained OpenMP Applications." Cluster Computing (CLUSTER), 2016 IEEE International Conference on. IEEE, 2016.
Keywords:

[compframe05]
N. Trebon, A. Morris, J. Ray, S. Shende, and A. Malony, "Performance Modeling of Component Assemblies with TAU," Proc. Workshop on Component Models and Frameworks in High Performance Computing (CompFrame 2005).
Keywords: CCA, TAU, CFRFS, Proxy components, performance modeling

[conpar94]
B. Mohr, D. Brown, A. Malony, TAU: A Portable Parallel Program Analysis Environment for pC++, Proceedings of CONPAR 94 - VAPP VI, University of Linz, Austria, LNCS 854, September 1994, pp. 29-40.
Keywords: TAU, tuning and analysis utilities, integrated tools, portable programanalysis, parallel object-oriented language, pC++, Sage++

[cug06]
S. Shende, A. D. Malony, A. Morris, and P. Beckman, "Performance and Memory Evaluation Using TAU," In Proc. for Cray User's Group Conference (CUG 2006), 2006.
Keywords: TAU, PDT, Memory Headroom Analysis, MFIX

[dapsys2k]
A. Malony and S. Shende, "Performance Technology for Complex Parallel and Distributed Systems," Proc. Third Austrian-Hungarian Workshop on Distributed and Parallel Systems, DAPSYS 2000, "Distributed and Parallel Systems: From Concepts to Applications," (Eds. G. Kotsis and P. Kacsuk)Kluwer, Norwell, MA, pp. 37-46, 2000.
Keywords: performance tools, complex systems, instrumentation, measurement, analysis, TAU

[dodugc04]
Daniel M. Pressel, David Cronk, and Sameer Shende, "PENVELOPE: A New Approach to Rapidly Predicting the Performance of Computationally Intensive Scientific Applications on Parallel Computer Architectures," Proc. 2004 DOD Users Group Conference, Williamsburg, Virginia, IEEE Computer Society, pp. 314-318, 2004.
Keywords: PENVELOPE, Performance Prediction, TAU

[epvmmpi05.a]
S. Shende, A. D. Malony, A. Morris, and F. Wolf, "Performance Profiling Overhead Compensation for MPI Programs," in Proc. EuroPVM/MPI 2005 Conference, (eds. B. Di. Martino et. al.), LNCS 3666, Springer, pp. 359-367, 2005.
Keywords: TAU, Performance measurement and analysis, parallel computing, profiling, message passing, overhead compensation

[epvmmpi05.b]
S. Moore, F. Wolf, J. Dongarra, S. Shende, A. Malony, and B. Mohr, "A Scalable Approach to MPI Application Performance Analysis," in Proc. of EuroPVM/MPI 2005, (eds. B. Di Martino) LNCS 3666, Springer, pp. 309-316, 2005.
Keywords: TAU, scalability, Performance measurement and analysis, parallel computing, profiling, tracing, KOJAK

[escience08]
Geoffrey C. Hulette, Matthew J. Sottile, Allen D. Malony: WOOL: A Workflow Programming Language. eScience 2008: 71-78
Keywords:

[etfa11]
Celio Estevan Moron, Allen D. Malony: Development of embedded multicore systems. ETFA 2011: 1-4
Keywords:

[etpsc92]
B. Mohr, Standardization of Event Traces Considered Harmful or Is an Implementation of Object-Independent Event Trace Monitoring and Analysis Systems Possible?, Proceedings of the CNRS-NSF Workshop on Environments and Tools For Parallel Scientific Computing, St. Hilaire du Touvet, France, Elsevier, Advances in Parallel Computing, Vol. 6, September 1992, pp. 103-124.
Keywords: event trace, analysis tools, monitoring, objects, object-independentmonitoring, standardization of event trace formats, access interfaces

[etpsc94]
Darryl I. Brown, Steven T. Hackstadt, Allen D. Malony, Bernd Mohr, Program Analysis Environments for Parallel Language Systems: The TAU Environment, Proc. of the Workshop on Environments and Tools For Parallel Scientific Computing, Townsend, TN, May 1994, pp. 162-171.
Keywords: parallel tool, pC++, integrated tool framework

[etpsc96]
Janice Cuny, Robert Dunn, Steven T. Hackstadt, Christopher Harrop, Harold H. Hersey, Allen D. Malony, and Douglas Toomey, Building Domain-Specific Environments for Computational Science: A Case Study in Seismic Tomography, International Journal of Supercomputing Applications and High Performance Computing, Vol. 11, No. 3, Fall 1997. Also appearing in the Proceedings of the Workshop on Environments and Tools For Parallel Scientific Computing, Lyon, France, August 1996.
Keywords: computational science, domain-specific environments, seismic tomography, visualization, distributed data access

[eurompi15]
Jean-Baptiste Besnard, Allen D. Malony, Sameer Shende, Marc Pérache, Patrick Carribault, Julien Jaeger: An MPI Halo-Cell Implementation for Zero-Copy Abstraction. EuroMPI 2015: 3:1-3:9
Keywords: MPI, Ghost-Cells, Zero-Copy, memory, MPI Halo

[eurompi16]
Besnard, J. B., Adam, J., Shende, S., Pérache, M., Carribault, P., & Jaeger, J. (2016, September). Introducing Task-Containers as an Alternative to Runtime-Stacking. In Proceedings of the 23rd European MPI Users' Group Meeting (pp. 51-63). ACM.
Keywords:

[europar03]
R. Bell, A. D. Malony, and S. Shende, "A Portable, Extensible, and Scalable Tool for Parallel Performance Profile Analysis", Proc. EUROPAR 2003 conference, LNCS 2790, Springer, Berlin, pp. 17-26, 2003.
Keywords: ParaProf, TAU, jracy, Profile Browser, scalable, visualization

[europar03.2]
Jeffrey K. Hollingsworth, Allen D. Malony, Jesús Labarta, Thomas Fahringer: Performance Evaluation and Prediction. Euro-Par 2003: 87
Keywords:

[europar04]
A. D. Malony, and S. S. Shende, "Overhead Compensation in Performance Profiling," Proc. Europar 2004 Conference, LNCS 3149, Springer, pp. 119-132, 2004.
Keywords: Performance measurement and analysis, parallel computing, profiling, intrusion, overhead compensation

[europar04.2]
José C. Cunha, Allen D. Malony, Arndt Bode, Dieter Kranzlmüller: Topic 1: Support Tools and Environments. Euro-Par 2004: 38
Keywords:

[europar05]
Allen D. Malony and Sameer Shende, "Models for On-the-Fly Compensation of Measurement Overhead in Parallel Performance Profiling, pp. 72-82, 2005.
Keywords: Performance measurement and analysis, parallel computing, profiling, intrusion, overhead compensation, TAU

[europar07]
A. Nataraj, M. Sottile, A. Morris. A.D. Malony, S. Shende. "TAUoverSupermon: Low-overhead Online Parallel Performance Monitoring." Presented at EuroPar 2007.
Keywords: Online performance measurement, cluster monitoring, TAU, supermon

[europar08]
A. Morris, W. Spear, A. D. Malony and S. Shende. "Observing Performance Dynamics using Parallel Profile Snapshots," European Conference on Parallel Processing (EuroPar 2008). August 2008
Keywords: TAU, Performance Snapshots, Performance Data, Performance Analysis

[europar08b]
K. Huck, W. Spear, A. Malony, S. Shende, and A. Morris, Parametric Studies in Eclipse with TAU and PerfExplorer, Workshop on Productivity and Performance (PROPER 2008), EuroPar 2008, Las Palmas de Gran Canaria, Spain, August, 2008.
Keywords: TAU, PerfExplorer, Eclipse, Parametric

[europar12]
Geoffrey C. Hulette, Matthew J. Sottile, Allen D. Malony: A Type-Based Approach to Separating Protocol from Application Logic - A Case Study in Hybrid Computer Programming. Euro-Par 2012: 40-51
Keywords:

[europar12.2]
Allen D. Malony, Helen D. Karatza, William J. Knottenbelt, Sally McKee: Topic 2: Performance Prediction and Evaluation. Euro-Par 2012: 52-53
Keywords:

[europar15]
Robert Lim, Allen D. Malony, Boyana Norris, Nicholas Chaimov: Identifying Optimization Opportunities Within Kernel Execution in GPU Codes. Euro- Par Workshops 2015: 185-196
Keywords:

[europar96]
Steven T. Hackstadt and Allen D. Malony, Distributed Array Query and Visualization for High Performance Fortran, Proc. of Euro-Par '96, Lyon, France, August 1996, pp. 55-63. Also available as University of Oregon, Department of Computer and Information Science, Technical Report CIS-TR-96-02, February 1996.
Keywords: visualization, distributed data access, hpf, parallel tool

[europar99]
Matthew Sottile and Allen Malony, INTERLACE: An Interoperation and Linking Architecture for Computational Engines, Proceedings of EuroPar 99 Conference, LNCS 1685, Springer, Berlin, pp.135-138, 1999.
Keywords: heterogeneous computing, reusability, computational servers, client/server, distributed objects, MatLab

[europara06]
A. Nataraj, A. Malony, A. Morris, S. Shende, "Early Experiences with KTAU on the IBM BG/L," Proc. EUROPAR 2006 Conference, Springer, LNCS 4128, pp. 99-110, 2006.
Keywords: TAU, KTAU, IBM BG/L, kernel profiling, zeptoOS, performance analysis

[europara06c]
L. Li, A. Malony, "Model-Based Performance Diagnosis of Master-Worker Parallel Computations," Euro-Par 2006 Parallel Processing Conference September 2006 (LNCS 4128). Pages 35-46.
Keywords: Performance diagnosis, parallel models, master-worker, measurement, analysis.

[europvm06]
K. Huck, A. Malony, S. Shende and A. Morris. "TAUg: Runtime Global Performance Data Access using MPI." EuroPVM/MPI Conference, LNCS 4192, pp. 313-321, Springer, September 2006.
Keywords: TAU, TAUg, global data acsess, performance monitoring, online performance adaption

[ewomp01]
B. Mohr, A. D. Malony, S. Shende, and F. Wolf, "Towards a Performance Tool Interface for OpenMP: An Approach Based on Directive Rewriting," Proceedings of EWOMP'01 Third European Workshop on OpenMP, Sept. 2001.
Keywords: OpenMP, directive rewriting, instrumentation interface, TAU, EXPERT

[ewomp02]
A Performance Monitoring Interface for OpenMP By Bernd Mohr , Allen D. Malony, Hans-Christian Hoppe, Frank Schlimbach, Grant Haab, Jay Hoeflinger, and Sanjiv Shah . Persented at EWOMP 2002
Keywords: OpenMP, Performance Monitoring, OMPI, POMP

[fmpc88]
Allen D. Malony, "Regular Processor Arrays," Proc., 2nd Symposium on the Frontiers of Massively Parallel Computation, IEEE, pp. 499-502, 1988.
Keywords: regularity, processor arrays, emulation, interconnection networks.

[front95]
J. Kundu and J. E. Cuny, A Scalable, Visual Interface for Debugging with Event-Based Behavioral Abstraction, Frontiers of Massively Parallel Computing, 1995, pp. 472-479.
Keywords: visualization, event-based debugging, Ariadne

[gpce12]
Geoffrey C. Hulette, Matthew J. Sottile, Allen D. Malony: Composing typemaps in Twig. GPCE 2012: 41-49
Keywords: Type mapping, Foreign function interface

[hcca89]
A. D. Malony, D. A. Reed, J. W. Arendt, R. A. Aydt, D. Grabas, and B. K. Totty, "An Integrated Performance Data Collection Analysis, and Visualization System," Proc. Fourth Conferenceon Hypercube Concurrent Computers and Applications, Mar. 1989. Also appears as Technical Report UIUCDCS-R-89-1504, Center for Supercomputing Research and Development, U. of Ill., March 1989.
Keywords: Intel iPSC/2, Performance Analysis

[hipc13]
A. S. Charif-Rubial, D. Barthou, C. Valensi, S. Shende, A. Malony, W. Jalby, "MIL : A language to build program analysis tools through static binary instrumentation," in Proc. 20th Annual International Conference on High Performance Computing, HiPC'13, Hyderabad, India, IEEE, December 2013.
Keywords: MAQAO, Binary instrumentation, TAU, OpenMP

[hipc14]
Hank Childs, Scott Biersdorff, David Poliakoff, David Camp, Allen D. Malony: Particle advection performance over varied architectures and workloads. HiPC 2014: 1-10
Keywords: GPGPU, Hybrid Parallelism, Flow Visualization, Performance Analysis

[hipc95]
D. Brown, A. Malony, B. Mohr, Language-based Parallel Program Interaction: the Breezy Approach, Proceedings of the International Conference on High Performance Computing (HiPC'95), India, December 1995.
Keywords: runtime interaction, data-parallel program, language integration,language-based tools

[hpcc05]
F. Wolf, A. D. Malony, S. Shende, and A. Morris, "Trace-Based Parallel performance Overhead Compensation," in Proc. of HPCC 2005 Conference, (eds. L. T. Yang, et. al.), LNCS 3726, Springer, pp. 617-628, 2005.
Keywords: KOJAK, Performance measurement, analysis, parallel computing, tracing, message passing, overhead compensation

[hpcc06]
W. Spear, A. Malony, A. Morris, S. Shende, "Integrating TAU with Eclipse: A Performance Analysis System in a Integrated Development Environment," High Performance Computing and Communications (HPCC) Conference. September 2006 (LNCS 4208). Pages 230-239.
Keywords: Eclipse, Integrated Development Environment, IDE, TAU

[hpcc06b]
L. Li, A. D. Malony, and K. Huck, "Model-Based Relative Performance Diagnosis of Wavefront Parallel Computations", in International Conference on High Performance Computing and Communications (HPCC2006), (Munich, Germany), 2006.
Keywords: performance diagnosis, parallel models, wavefront, relative analysis

[hpccbse04]
B. Norris, J. Ray, R. Armstrong, L. C. McInnes. D. E. Bernholdt. W. R. Elwasif, A. D. Malony and S. Shende, "Computational Quality of Service for Scientific Components," Proceedings of the International Symposium on Component-Based Software Engineering (CBSE7), Edinburgh, Scotland, LNCS 3054, Springer, pp. 264-271, May 2004. Also available as Argonne National Laboratory preprint ANL/MCS-P1131-0204.
Keywords: QoS, Components, CCA, TAU

[hpcn99]
A. Malony, J. Skidmore, and M. Sottile. Computational Experiments using Distributed Tools in a Web-based Electronic Notebook Environment, Proceedings of HPCN Europe '99, LNCS 1593, Springer, Berlin, pp. 381 -390, April 1999.
Keywords:

[hpcs13]
Adnan Salman, Allen D. Malony, Sergei Turovets, Vasily Volkov, David Ozog, Don M. Tucker: Next-generation human brain neuroimaging and the role of high-performance computing. HPCS 2013: 234-242
Keywords:

[hpdc15]
Allen D. Malony: Through the Looking-Glass: From Performance Observation to Dynamic Adaptation. HPDC 2015: 1
Keywords: High‐performance computing; runtime environments; optimization methods

[hpdc15.2]
Daniel A. Ellsworth, Allen D. Malony, Barry Rountree, Martin Schulz: POW: System-wide Dynamic Reallocation of Limited Power in HPC. HPDC 2015: 145- 148
Keywords: RAPL; hardware over-provisioning; HPC; power bound

[hpdc16]
Nicholas Chaimov, Allen D. Malony, Shane Canon, Costin Iancu, Khaled Z. Ibrahim, Jay Srinivasan: Scaling Spark on HPC Systems. HPDC 2016: 97-110
Keywords:

[hpdc98]
Steven T. Hackstadt, Christopher W. Harrop, and Allen D. Malony, A Framework for Interacting with Distributed Programs and Data, Proceedings of the Seventh IEEE International Symposium on High Performance Distributed Computing (HPDC7), Chicago, IL, July 28-31, 1998, pp. 206-214. Also available as University of Oregon, Department of Computer and Information Science, Technical Report CIS-TR-98-02, June 1998.
Keywords: parallel tools, distributed arrays, visualization, computational steering, model coupling, runtime interaction, data access, Fortran 90

[ica04]
Kevin A. Glass, Gwen A. Frishkoff, Robert M. Frank, Colin Davey, Joseph Dien, Allen D. Malony, Don M. Tucker: A Framework for Evaluating ICA Methods of Artifact Removal from Multichannel EEG. ICA 2004: 1033-1040
Keywords:

[icassp12]
David K. Hammond, Benoit Scherrer, Allen D. Malony: Incorporating anatomical connectivity into EEG source estimation via sparse approximation with cortical graph wavelets. ICASSP 2012: 573-576
Keywords: EEG source estimation, sparse representation, inverse problems, graph wavelets

[iccs03]
J. Dongarra, A. D. Malony, S. Moore, P. Mucci, and S. Shende, "Performance Instrumentation and Measurement for Terascale Systems," Proc. International Conference on Computational Science (ICCS 2003), LNCS 2660, Springer, Berlin, pp. 53-62, 2003.
Keywords: TAU, PAPI, Perfometer, instrumentation, measurement, performance analysis, terascale

[iccs03b]
Michael O. McCracken, Allan Snavely, Allen Malony, "Performance Modeling for Dynamic Algorithm Selection," Proc. International Conference on Computational Science (ICCS'03), LNCS 2660, Springer, Berlin, pp. 749-758, 2003.
Keywords: performance modeling, adaptive algorithms

[iccs05]
Adnan Salman, Sergei Turovets, Allen Malony, Jeff Eriksen, and Don Tucker, "Computational Modeling of Human Head Conductivity." Presented at International Conference on Computational Science.
Keywords: Computational Modeling, alternating direction implicit, algorithm, ADI, OpenMP

[iccs07]
Adnan Salman, Allen D. Malony, Sergei Turovets, Don M. Tucker: Use of Parallel Simulated Annealing for Computational Modeling of Human Head Conductivity. International Conference on Computational Science (1) 2007: 86-93
Keywords:

[iccs08]
Wyatt Spear, Allen D. Malony, Alan Morris, Sameer Shende: Performance Tool Workflows. ICCS (3) 2008: 276-285
Keywords:

[iccs09]
H. Jagode, J. Dongarra, S. Alam, J. Vetter, W. Spear, A. Malony. A Holistic Approach for Performance Measurement and Analysis for Petascale Applications. International Conference on Computational Science (ICCS 2009), Baton Rouge, LA, 2009
Keywords: TAU, Performance Analysis, Performance Tools, Profiling, Tracing, Trace files, Petascale Applications, Petascale Systems

[iccs09.2]
Adnan Salman, Allen D. Malony, Matthew J. Sottile: An Open Domain-Extensible Environment for Simulation-Based Scientific Investigation (ODESSI). ICCS (1) 2009: 23-32
Keywords:

[iccs09.3]
Vasily Volkov, Aleksei Zherdetsky, Sergei Turovets, Allen D. Malony: A 3D Vector-Additive Iterative Solver for the Anisotropic Inhomogeneous Poisson Equation in the Forward EEG problem. ICCS (1) 2009: 511-520
Keywords:

[iccs09b]
M. Geimer, S. Shende, A. D. Malony, F. Wolf, "A Generic and Configurable Source-Code Instrumentation Component". Proceedings of the International Conference on Computational Science 2009. pp. 696-705, LNCS 5545.
Keywords: TAU, instrumentation, source preprocessing

[iccs11]
J. Enkovaara, N. A. Romero, S. Shende, J. J. Mortensen, "GPAW - massively parallel electronic structure calculations with Python-based software." International Conference on Computational Science 2011.
Keywords: Python, Numpy, MPI, Density-functional theory

[iccs15]
Abhinav Sarje, Sukhyun Song, Douglas Jacobsen, Kevin A. Huck, Jeffrey K. Hollingsworth, Allen D. Malony, Samuel Williams, Leonid Oliker: Parallel Performance Optimizations on Unstructured Mesh-based Simulations. ICCS 2015: 2016-2025
Keywords: Unstructured Mesh, Ocean Modeling, Graph Partitioning, Performance Optimization

[iccs16]
Zhang, X., Abbasi, H., Huck, K., & Malony, A. D. (2016). Wowmon: A machine learning- based profiler for self-adaptive instrumentation of scientific workflows. Procedia Computer Science, 80, 1507-1518.
Keywords:

[icpads14]
Nicholas Chaimov, Boyana Norris, Allen D. Malony: Toward multi-target autotuning for accelerators. ICPADS 2014: 534-541
Keywords:

[icpads14.2]
David Ozog, Allen D. Malony, Jeff R. Hammond, Pavan Balaji: WorkQ: A many-core producer/consumer execution model applied to PGAS computations. ICPADS 2014: 632-639
Keywords:

[icpe15]
Xiaoguang Dai, Boyana Norris, Allen D. Malony: Autoperf: Workflow Support for Performance Experiments. WOSP-C@ICPE 2015: 11- 16
Keywords: performance measurement, performance analysis

[icpp05]
K. A. Huck, A. D. Malony, R. Bell, and A. Morris, "Design and Implementation of a Parallel Performance Data Management Framework," Proc. International Conference on Parallel Processing (ICPP 2005), IEEE Computer Society, 2005.
Keywords: TAU, PerfDMF, ParaProf, Performance Data Management Framework

[icpp09]
S. Biersdorff, C. W. Lee, A. Malony, L. V. Kale, "Integrated Performance Views in Charm++: Projections Meets TAU." International Conference on Parallel Processing, September 2009.
Keywords: Charm++, TAU, Projections, NAMD

[icpp10]
A. Morris, A. Malony, S. Shende, and K. Huck "Design and Implementation of a Hybrid Parallel Performance Measurement System." International Conference on Parallel Processing September 2010. pages 492-501
Keywords: parallel, performance, measurement, analysis,sampling, tracing, profiling

[icpp11]
A. D. Malony, S. Biersdorff, S. Shende, H. Jagode, S. Tomov, G. Juckeland, R. Dietrich, D. Poole and C. Lamb, "Parallel Performance Measurement of Heterogeneous Parallel Systems with GPUs." Presented at International Conference on Parallel Processing Sept 2011.
Keywords: TAU, PAPI, Vampir, GPU, CUDA, Heterogeneous systems

[icpp13]
D. Ozog, J. Hammond, J. Dinan, P. Balaji, S. Shende, A. Malony, "Inspector-Executor Load Balancing Algorithms for Block-Sparse Tensor Contractions," in Proc. International Conference on Parallel Processing (ICPP'13), IEEE, 10.1109/ICPP.2013.12, 2013.
Keywords: Dynamic Load Balancing, Static Partitioning, Tensor Contractions, Quantum Chemistry, Global Arrays, TAU

[icpp86]
Walid Abu-Sufah, Allen D. Malony, "Vector Processing on the Alliant FX/8 Multiprocessor," Proc. of ICPP 1986, pp. 559-566, 1986.
Keywords: Alliant, Vector processing, Cedar, performance measurement.Alliant, Vector processing, Cedar, performance measurement.Alliant, Vector processing, Cedar, performance measurement.Alliant, Vector processing, Cedar, performance measurement.Alliant, Vector processing, Cedar, performance measurement.

[icpp87]
Allen D. Malony, Daniel A. Reed, Patrick J. McGuire,"MPF: A Portable Message Passing Facility for Shared Memory Multiprocessors," Proc. ICPP 1987: pp. 739-741, 1987.
Keywords: message passing, shared memory

[icpp95]
J. Kundu and J. E. Cuny, The Integration of Event- and State-Based Debugging in Ariadne, Proceedings of the International Conference on Parallel Processing (ICPP '95), August 1995, pp. II 130-134.
Keywords: event-based debugging, state-based debugging, Ariadne

[ics10]
A. Malony, S. Biersdorff, W. Spear, S. Mayanglambam. "An Experimental Approach to Performance Measurement of Heterogeneous Parallel Applications using CUDA." Presented at International Conference on Supercomputing, Tsukuba, Japan 2010.
Keywords: Performance tools, GPGPU, profiling, tracing

[ics13]
David Ozog, Sameer Shende, Allen D. Malony, Jeff R. Hammond, James Dinan, Pavan Balaji: Inspector/executor load balancing algorithms for block-sparse tensor contractions. ICS 2013: 483-484
Keywords: Dynamic Load Balancing, Static Paritioning, Tensor Contractions, Quantum Chemistry, Global Arrays

[ics89]
Kyle Gallivan, William Jalby, Allen Malony, Harry Wijshoff, "Performance Prediction of Loop Constructs on Multiprocessor Hierarchical-Memory Systems," Proc. 3rd International Conference on Supercomputing (ICS'86), pp. 433-442, 1986.
Keywords: Supercomputers, Concurrent programming structures

[ics90]
Allen D. Malony, Daniel A. Reed, "A Hardware-based Performance Monitor for the Intel iPSC/2 Hypercube, Proc. 4th International Conference on Supercomputing (ICS'90), pp. 213-226, 1990.
Keywords: performance monitoring, Hypermon

[ics99]
S. Vajracharya, S. Karmesin, P. Beckman, J. Crotinger, A. Malony, S. Shende, R. Oldehoeft, and S. Smith, "SMARTS: Exploiting Temporal Locality and Parallelism through Vertical Execution," Proceedings of ACM International Conference on Supercomputing (ICS '99), pp. 302-310, 1999.
Keywords: SMARTS, asynchronous, threads, profiling, tracing, vertical executiondata-parallelism, dependence-driven execution, runtime system, barriersynchronization, TAU

[ijhpca13]
Nicholas Chaimov, Scott Biersdorff, Allen D. Malony: Tools for machine-learning-based empirical autotuning and specialization. IJHPCA 27(4): 403-411 (2013)
Keywords: autotuning, specialization, TAU, machine learning, decision trees

[ipdps03]
S. Shende, A. D. Malony, C. Rasmussen, M. Sottile, "A Performance Interface for Component-Based Applications," Proc. International Workshop on Performance Modeling, Evaluation, and Optimization of Parallel and Distributed Systems, IPDPS'03, IEEE Computer Society, 278, 2003.
Keywords: TAU, Component Interface, SIDL, CCAFFEINE, PDT, Babel

[ipdps04]
J. Ray, N. Trebon, R. C. Armstrong, S. Shende, and A. Malony, "Performance Measurement and Modeling of Component Applications in a High Performance Computing Environment: A Case Study," Proc. 18th International Parallel and Distributed Processing Symposium (IPDPS'04), IEEE Computer Society, 2004.
Keywords: CCA, Performance modeling, CFRFS Combustion, TAU

[ipdps06]
D. B. Keith, C. C. Hoge, Robert M. Frank, Allen D. Malony: Parallel ICA methods for EEG neuroimaging. IPDPS 2006
Keywords:

[ipdps07]
Li Li, Allen D. Malony: Automatic Performance Diagnosis of Parallel Computations with Compositional Models. IPDPS 2007: 1-8
Keywords:

[ipdps16]
Ozog, D., Kamil, A., Zheng, Y., Hargrove, P., Hammond, J. R., Malony, A., ... & Yelick, K. (2016, May). A hartree-fock application using upc++ and the new darray library. In Parallel and Distributed Processing Symposium, 2016 IEEE International (pp. 453-462). IEEE.
Keywords: -Hartree-Fock, self-consistent field (SCF), quantum chemistry, PGAS, UPC/UPC++, Global Arrays, performance analysis, load balancing, work stealing, attentiveness

[ipdps16.ws]
Patricia Grubel, Hartmut Kaiser, Kevin A. Huck, Jeanine Cook: Using Intrinsic Performance Counters to Assess Efficiency in Task-Based Parallel Applications. IPDPS Workshops 2016: 1692-1701
Keywords: runtime instrumentation, performance counters; execution monitoring; HPX; task-based parallelism; many asynchronous tasks

[ipdps16.ws2]
Ozog, D., Malony, A. D., & Siegel, A. R. (2015, May). A Performance Analysis of SIMD Algorithms for Monte Carlo Simulations of Nuclear Reactor Cores. In Parallel and Distributed Processing Symposium (IPDPS), 2015 IEEE International (pp. 733- 742). IEEE.
Keywords: Monte Carlo, neutron transport, reactor simulation, performance, SIMD, Intel Xeon Phi coprocessor, MIC

[ipdps16.ws3]
Ellsworth, D., Patki, T., Perarnau, S., Seo, S., Amer, A., Zounmevo, J., ... & Schulz, M. (2016, May). Systemwide Power Management with Argo. In Parallel and Distributed Processing Symposium Workshops, 2016 IEEE International (pp. 1118- 1121). IEEE.
Keywords:

[ipps94]
A. Malony, B. Mohr, P. Beckman, D. Gannon, S. Yang, F. Bodin, Performance Analysis of pC++: A Portable Data-Parallel Programming System for Scalable Parallel Computers, Proceedings of the 8th International Parallel Processing Symbosium (IPPS), Cancn, Mexico, April 1994, pp. 75-85.
Keywords: parallel C++, portability, scalability, SPMD, runtime system,concurrency and communication primitives, performance

[ipps95]
B. Helm. A. D. Malony, S. P. Fickas, "Capturing and Automating Performance Diagnosis: the Poirot approach," Proc. 9th International Parallel Processing Symposium (IPPS'95), pp.
Keywords: software performance evaluation, program debugging, diagnostic expert systems, performance diagnosis, Poirot, parallel programming, diagnosis methods, performance tools, performance debugging, knowledge-based diagnosis, software engineering

[isc16]
Chaimov, N., Malony, A., Iancu, C., & Ibrahim, K. (2016, June). Scaling Spark on Lustre. In International Conference on High Performance Computing (pp. 649-659). Springer International Publishing.
Keywords:

[iscope99]
T. Sheehan, A. Malony, S. Shende, "A Runtime Monitoring Framework for the TAU Profiling System", Proceedings of the Third International Symposium on Computing in Object-Oriented Parallel Environments (ISCOPE'99), LNCS 1732, Springer, Berlin, pp. 170-181, December 1999.
Keywords: monitor, runtime data access, performance monitoring,parallel execution, performance tools, runtime interaction, Java,TAU, multi-threaded

[ishpc02]
J. D. de St. Germain, A. Morris, S. G. Parker, A. D. Malony, and S. Shende, "Integrating Performance Analysis in the Uintah Software Development Cycle," Proceedings of the ISHPC'02 conference, LNCS 2327,Springer, Berlin, pp. 190-206, 2002.
Keywords: Uintah, TAU, MPI, SCIRun, XPARE

[ishpc03]
Holger Brunst, Allen D. Malony, Sameer S. Shende, and Robert Bell, "Online Remote Trace Analysis of Parallel Applications on High-Performance Clusters", Proceedings of ISHPC'03 Conference, LNCS 2858, Springer, Berlin, pp. 440-449,2003.
Keywords: Parallel Computing, Performance Analysis, Performance Steering, Tracing, Parallel Computing, Performance Analysis, Performance Steering, Tracing, VNG, TAU

[ispdc14]
Celio Estevan Moron, Antonio Ideguchi, Marcio Merino Fernandes, Allen D. Malony: From MultiTask to MultiCore: Design and Implementation Using an RTOS. ISPDC 2014: 111-118
Keywords:

[istspie95]
Steven T. Hackstadt and Allen D. Malony, Case Study: Applying Scientific Visualization to Parallel Performance Visualization, Proc. of the IST&T/SPIE symposium on Electronic Imaging: Science and Technology, Conference on Visual Data Exploration and Analysis, San Jose, CA, February 1995, pp. 238-247.
Keywords: parallel performance visualization, case study, data explorer, scientific visualization

[iwomp05]
Adnan Salman , Sergei Turovets, Allen Malony, and Vasily Volkov, "Multi-Cluster, Mixed-Mode Computational Modeling of Human Head Conductivity." Presented at IWOMP 2005
Keywords: MPI, OpenMPI, Multi-Cluster, Computational Modeling

[iwomp06]
A. Morris, A. D. Malony, S. Shende, "Supporting Nested OpenMP Parallelism in the TAU Performance System," (to appear) Proceedings of the IWOMP 2006 Conference, Springer, LNCS, 2007.
Keywords: TAU, OpenMP, Nested Parallelism

[iwomp13]
Ahmad Qawasmeh, Abid Muslim Malik, Barbara M. Chapman, Kevin A. Huck, Allen D. Malony: Open Source Task Profiling by Extending the OpenMP Runtime API. IWOMP 2013: 186-199
Keywords: OpenMP, OpenMP Runtime API for Profiling, Open-Source Implementation, OpenMP Tasks.

[iwomp14]
Kevin A. Huck, Allen D. Malony, Sameer Shende, Doug W. Jacobsen: Integrated Measurement for Cross-Platform OpenMP Performance Analysis. IWOMP 2014: 146-160
Keywords:

[javagrande01]
S. Shende and A. D. Malony, "Integration and Application of the TAU Performance System in Parallel Java Environments," Proceedings of the Joint ACM Java Grande - ISCOPE 2001 Conference, pp. 87-96, June 2001.
Keywords: TAU, Profiling, Tracing, Java, MPI, JVMPI, Instrumentation, Measurement

[javaics2k]
S. Shende, and A. D. Malony, "Performance Tools for Parallel Java Environments," Proc. Second Workshop on Java for High Performance Computing, ICS 2000, May 2000.
Keywords: parallel, mpiJava, TAU, performance profiling, tracing, MPI

[kdd07]
Dejing Dou, Gwen A. Frishkoff, Jiawei Rong, Robert M. Frank, Allen D. Malony, Don M. Tucker: Development of NeuroElectroMagnetic ontologies(NEMO): a framework for mining brainwave ontologies. KDD 2007: 270-279
Keywords: H.2.8 [Database applications]: Data mining; J.3 [Life and Medical Science]: Neuroscience; I.2.4 [Knowledge Representation Formalism and Methods]: Ontology

[lacsi01]
B. Mohr, A. D. Malony, S. Shende, and F. Wolf, "Design and Prototype of a Performance Tool Interface for OpenMP," Proceedings of the LACSI Symposium, 2001.
Keywords: OpenMP, API, POMP, TAU, EXPERT, Performance Tool Interface

[linux99]
S. Shende, Profiling and Tracing in Linux, Proceedings of the Extreme Linux Workshop #2, USENIX, Monterey CA, June 1999.
Keywords: profiling, performance, tracing, linux, clusters, TAU

[miar06]
Kai Li, Allen D. Malony, Don M. Tucker: A Multiscale Morphological Approach to Topology Correction of Cortical Surfaces. MIAR 2006: 52-59
Keywords:

[mmb95]
K. Shanmugam, A. Malony, B. Mohr, Speedy: An Integrated Performance Extrapolation Tool for pC++ Programs, Proceedings of the Joint Conference PERFORMANCE TOOLS '95 and MMB '95, September 1995, Heidelberg, Germany.
Keywords: performance prediction, extrapolation, object-parallel programming,trace-driven simulation, performance debugging tools, modeling

[mmb95a]
Alois Ferscha and Allen D. Malony, "Performance-Oriented Development of Irregular, Unstructured and Unbalanced Parallel Applications in the N-MAP Environment, " Proc. 8th GI/ITG Conference on Measuring, Modeling and Evaluating Computing and Communication Systems, MMB '95, LNCS 977, Springer, Berlin, pp. 340-356, 1995.
Keywords: Performance Prediction, Parallel Programming, Task Level Parallelism, Irregular Problems, Parallel Simulation, Time Warp, CM-5, Cluster Computing, N-MAP

[mmvr11]
Allen D. Malony, Adnan Salman, Sergei Turovets, Don M. Tucker, Vasily Volkov, Kai Li, Jung Eun Song, Scott Biersdorff, Colin Davey, Chris Hoge, David K. Hammond: Computational Modeling of Human Head Electromagnetics for Source Localization of Milliscale Brain Dynamics. MMVR 2011: 329-335
Keywords:

[mttcpe94]
Allen D. Malony, Vassilis Mertsiotakis, Andreas Quick, "Automatic Scalability Analysis of Parallel Programs Based on Modeling Techniques," In G. Haring and G. Kotsis, editors, Proc. 7th International Conference on Modeling Techniques and Tools for Computer Performance Evaluation, LNCS, Springer, 1994.
Keywords: scalability analysis, performance modeling, PDL, PEPP

[para06a]
S. Shende, A. Malony, A. Morris, "Optimization of Instrumentation in Parallel Performance Evaluation Tools," in Proc. PARA 2006 Conference, Springer, LNCS, 2006.
Keywords: Instrument optimization, selective instrumentation, measurement, Performance measurement and analysis, parallel computing

[para06b]
S. Shende, A. Malony, A. Morris, "Workload Characterization using the TAU Performance System," in Proc. of PARA 2006 Conference, Springer, LNCS, 2006.
Keywords: Performance mapping, measurement, instrumentation, performance evaluation, workload characterization

[para10]
Sameer Suresh Shende, Allen D. Malony, Alan Morris: Improving the Scalability of Performance Evaluation Tools. PARA (2) 2010: 441-451
Keywords: Measurement, instrumentation, analysis, performance tools

[para98]
Sameer Shende, Steven T. Hackstadt, and Allen D. Malony, "Dynamic Performance Callstack Sampling: Merging TAU and DAQV-II," Proceedings of the Fourth International Workshop on Applied Parallel Computing (PARA98), June 14-17, 1998, LNCS 1541, Springer, Berlin, pp. 515-520, 1998.
Keywords: monitoring, performance, callstack, sampling, profiling, TAU, DAQV, parallel execution, performance tools, runtime interaction, C++

[parco03]
A. D. Malony, S. Shende, and R. Bell, "Online Performance Observation of Large-Scale Parallel Applications," Proc. Parco 2003 Symposium, in "Parallel Computing: Software Technology, Algorithms, Architectures and Applications," (Eds. G. R. Joubert, W. E. Nagel, F. J. Peters, and W. V. Walter), Advances in Parallel Computing, Vol. 13, Elsevier B.V., pp. 761 -768, 2004.
Keywords: Paraprof, Parvis, TAU, performance analysis, large-scale, parallel computing

[parco03b]
H. Brunst, W. Nagel, "Scalable Performance Analysis of Parallel Systems: Concepts and Experiences," Proc. PARCO 2003 Conference, in (J. Joubert, W. Nagel, F. Peters, W. Walter eds.), Parallel Computing: Software Technology, Algorithms, Architectures and Applications, Advances in Parallel Computing 13 Elsevier 2004, pp. 737-744, 2004.
Keywords: Parallel Computing, Performance Analysis, Tracing, Profiling, Clusters, VampirServer, VNG, OTF

[parco05]
A. D. Malony, S. Shende, and A. Morris, "Phase-Based Parallel Performance Profiling," (to appear) Proc. of PARCO 2005 conference.
Keywords: TAU, Performance measurement and analysis, parallel computing, profiling, phases

[parco07b]
K. A. Huck, A. D. Malony, S. Shende, and A. Morris, "Scalable, Automated Performance Analysis with TAU and PerfExplorer", in Parallel Computing (ParCo2007), (Aachen, Germany), 2007.
Keywords: performance evaulation, TAU, PerfExplorer, performance scripting, metadata

[parco09]
Shangkar Mayanglambam, Allen D. Malony, Matthew J. Sottile: Performance Measurement of Applications with GPU Acceleration using CUDA. PARCO 2009: 341-348
Keywords:

[parco09.2]
Allen D. Malony, Shangkar Mayanglambam, Laurent Morin, Matthew J. Sottile, Stéphane Bihan, Sameer Shende, François Bodin: Performance Tool Integration in a GPU Programming Environment: Experiences with TAU and HMPP. PARCO 2009: 685-692
Keywords:

[parco11]
S. Shende, A. D. Malony, W. Spear, and K. Schuchardt, "Characterizing I/O Performance Using the TAU Performance System." Presented at ICPP Parco 2011 conference Exascale Mini-symposium.
Keywords: POSIX I/O, MPI-IO, TAU, Instrumentation, GCRM

[parle94]
Steven T. Hackstadt and Allen D. Malony, Next-Generation Parallel Performance Visualization: A Prototyping Environment for Visualization Development, Proc. of the Parallel Architectures and Languages Europe (PARLE) Conference, Athens, Greece, July 1994, pp. 192-201. Also available as University of Oregon, Department of Computer and Information Science, Technical Report CIS-TR-93-23, October 1993.
Keywords: parallel performance visualization, scientific visualization, visualization prototyping

[pcfd05]
S. Shende, A. Malony, A. Morris, S. Parker, J. Davison de St. Germain, "Performance Evaluation of Adaptive Scientific Applications using TAU," Parallel Computational Fluid Dynamics: Theory and Applications, Proceedings of the 2005 International Conference on Parallel Computational Fluid Dynamics, May 24-27.
Keywords: TAU, Performance Evaluation, CFD, Uintah Computational Framework, Phases

[pdp14]
Allen D. Malony, Kevin A. Huck: General Hybrid Parallel Profiling. PDP 2014: 204-212
Keywords: Parallel, performance, analysis, tools

[pdp16]
Ozog, D., Malony, A. D., & Guenza, M. (2016, February). The UA? CG Workflow: High Performance Molecular Dynamics of Coarse-Grained Polymers. In Parallel, Distributed, and Network-Based Processing (PDP), 2016 24th Euromicro International Conference on (pp. 272-279). IEEE.
Keywords: -atomistic simulation, coarse-graining, scientific workflows, polymeric liquids, LAMMPS

[pdpta01]
S. Shende, A. D. Malony, R. Ansell-Bell, "Instrumentation and Measurement Strategies for Flexible and Portable Empirical Performance Evaluation," Proceedings Tools and Techniques for Performance Evaluation Workshop, PDPTA'01, CSREA, Vol. 3, pp. 1150-1156, June 2001.
Keywords: TAU, instrumentation, measurement, DyninstAPI, MPI

[pmvpmvps93]
Allen D. Malony, Gregory V. Wilson, "Future directions in parallel performance environments", Proceedings of the workshop on performance measurement and visualization on Performance measurement and visualization of parallel systems, Elsevier Science Publishers, B.V., Amsterdam, pp. 331-351, 1993.
Keywords: processor architectures, parallel programming, performance measurement

[ppam05]
Marian Bubak, Wlodzimierz Funika, Marcin Koch, Dominik Dziok, Allen D. Malony, Marcin Smetek, Roland Wismüller: Towards the Performance Visualization of Web-Service Based Applications. PPAM 2005: 108-115
Keywords: performance visualization, monitoring tools, OMIS, TAU, web service.

[ppopp91]
Allen D. Malony, "Event-based Performance Perturbation: a Case Study," Proc. third ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPOPP'91), pp. 201-212, 1991.
Keywords: performance perturbation, performance measurement, event-based analysis, uncertainty principle

[ppopp93]
Sekhar R. Sarukkai, Allen D. Malony, "Perturbation Analysis of High Level Instru mentation for SPMD Programs," Proc. fourth ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (PPoPP'93), pp. 44-53, 1993.
Keywords: perturbation analysis, performance measurement

[proper10]
C. W. Lee, A. D. Malony, and A. Morris, "TAUmon: Scalable Online Performance Data Analysis in TAU", in 3rd Workshop on Productivity and Performance (PROPER 2010), 2010.
Keywords: TAU, scalability, performance analysis tools, online monitoring

[proper11]
W. Spear, A. D. Malony, C. W. Lee, S. Biersdorff, S. Shende. "An Approach to Creating Performance Visualizations in a Parallel Profile Analysis Tool." Presented at the Workshop on Productivity and Performance (PROPER 2011), August 2011.
Keywords: TAU, ParaProf, Topology, Performance visualization

[psc94]
A. Malony, B. Mohr, P. Beckman, D. Gannon, Program Analysis and Tuning Tools for a Parallel Object Oriented Language: An Experiment with the TAU System, Proceedings of the Workshop on Parallel Scientific Computing, Cape Cod, MA, October 1994.
Keywords:

[ross13]
K. Huck, S. Shende, A. Malony, H. Kaiser, A. Porterfield, R. Brightwell, "An Early Prototype of an Autonomic Performance Environment for Exascale." Published in Proceedings of the 3rd International Workshop on Runtime and Operating Systems for Supercomputers, ICS'13, ACM, DOI: 10.1145/2491661.2481434, 2013.
Keywords: online performance analysis, performance introspection, TAU

[sc00]
K. A. Lindlan, J. Cuny, A. D. Malony, S. Shende, B. Mohr, R. Rivenburgh, C. Rasmussen. "A Tool Framework for Static and Dynamic Analysis of Object-Oriented Software with Templates." Proceedings of SC2000: High Performance Networking and Computing Conference, Dallas, November 2000.
Keywords: Program Database Toolkit, PDT, static analysis, dynamic analysis, object-oriented, templates, IL Analyzer, DUCTAPE, TAU, SILOON

[sc05]
K. A. Huck, and A. D. Malony, "PerfExplorer: A Performance Data Mining Framework for Large- Scale Parallel Computing," in Proc. of SC 2005 Conference, ACM, 2005.
Keywords: performance data mining, PerfExplorer, TAU, PerfDMF, R, Weka

[sc05b]
Knowledge Engineering for Model-based Parallel Performance Diagnosis (Poster) By Li Li and Allen D. Malony Computer and Information Science Department, University of Oregon, Eugene, OR
Keywords: performance knowledge, performance diagosis

[sc05c]
K. Karavanic, J. May, K. Mohror, B. Miller, K. Huck, R. Knapp, and B. Pugh, "Integrating Database Technology with Comparison-Based Parallel Performance Diagnosis: The Perftrack Performance Experiment Management Tool", in International Conference for High Performance Computing, Networking, Storage and Analysis (SC'05), (Washington, DC, USA), IEEE Computer Society, 2005.
Keywords: TAU, Perftrack, experiment management, performance diagnosis

[sc06]
Allen D. Malony, Wolfgang E. Nagel: Open trace - The open trace format (OTF) and open tracing for HPC. SC 2006: 24
Keywords:

[sc07]
A. Nataraj, A. Morris, A. Malony, M. Sottile, P. Beckman, "The Ghost in the Machine: Observing the Effects of Kernel Operation on Parallel Application Performance." Supercomputing Conference 2007.
Keywords: kernel, operating system noise, interference, integrated measurement, KTAU, TAU, compensation, tracing

[sc08]
K. A. Huck, O. Hernandez, V. Bui, S. Chandrasekaran, B. Chapman, A. D. Malony, L. C. McInnes, and B. Norris, "Capturing Performance Knowledge for Automated Analysis", in International Conference for High Performance Computing, Networking, Storage and Analysis (SC'08), 2008.
Keywords: TAU, performance knowledge, automaticed analysis, compiler basied instrumentation, compiler optimizations

[sc13a]
H. Radhakrishnan, D. Rouson, K. Morris, S. Shende, and S. Kassinos, "Test-driven coarray parallelization of a legacy Fortran Application," Proc. SE-HPCCSE 2013: 1st International Workshop on Software Engineering for Performance Computing in Computational Science and Engineering, workshop at SC'13, ACM SIGHPC, pp. 33-40, 2013.
Keywords: performance evaluation, TAU, PRM, Fortran 2008, Co-array Fortran

[sc15]
Daniel A. Ellsworth, Allen D. Malony, Barry Rountree, Martin Schulz: Dynamic power sharing for higher job throughput. SC 2015: 80:1-80:11
Keywords: RAPL; hardware over-provisioning; HPC; power bound

[sc16]
Daniel A. Ellsworth, Tapasya Patki, Martin Schulz, Barry Rountree, Allen D. Malony: A Unified Platform for Exploring Power Management Strategies. E2SC@SC 2016: 24- 30
Keywords:

[sc16.poster]
J. Linford, S. Vadlamani, S. Shende, A. D. Malony, W. Jones, W. K. Anderson, E. Nielsen, "Performance Engineering FUN3D at Scale with TAU Commander", Poster, SC'16 Conference, 2016.
Keywords: TAU Commander, TAU, FUN3D, Performance Engineering, NASA

[sc2001]
H. Truong, T. Fahringer, G. Madsen, A. Malony, H. Moritsch, and S. Shende, "On Using SCALEA for Performance Analysis of Distributed and Parallel Programs," Proceedings of SC'2001 conference, Nov. 2001.
Keywords: Performance analysis, performance overhead classification, distributed and parallel systems, SCALEA, TAU, OpenMP

[sc2003.poster]
Sophia Lefantzi, Jaideep Ray, and Sameer Shende, "Strong Scalability Analysis and Performance Evaluation of a SAMR CCA-based Reacting Flow Code," Poster, SC2003 Conference, Nov. 2003.
Keywords: CCA, Performance modeling, CFRFS Combustion, TAU

[sc90]
Sanjay Sharma, Allen D. Malony, Michael W. Berry, Priyamvada Sinvhal- Sharma, "Run-time monitoring of concurrent programs on the Cedar multiprocessor ," Proc. 1990 conference on Supercomputing, pp. 784-793, 1990
Keywords: Cedar, Tracing, processor architectures

[sc90b]
Allen D. Malony, John L. Larson, Daniel A. Reed, "Tracing Application Program Execution on the Cray X-MP and Cray 2," Proc. of the 1990 conference on Supercomputing, pp. 60-73, 1990.
Keywords: Tracing

[sc92]
Allen D. Malony, "Supercomputing Around the World," Proc. 1992 ACM/IEEE Conference on Supercomputing (mini symposium), pp. 126-129, 1992.
Keywords: Supercomputing

[sc93]
F. Bodin, P. Beckman, D. Gannon, S. Yang, S. Kesavan, A. Malony, B. Mohr, Implementing a Parallel C++ Runtime System for Scalable Parallel Systems, Proceedings of the 1993 Supercomputing Conference, Portland, Oregon, November 1993, pp. 588-597.
Keywords: parallel C++, portability, scalability, SPMD, runtime system,concurrency and communication primitives, performance

[sc98a]
Christopher W. Harrop, Steven T. Hackstadt, Janice E. Cuny, Allen D. Malony, and Laura S. Magde, Supporting Runtime Tool Interaction for Parallel Simulations, Proceedings of Supercomputing '98 (SC98), Orlando, FL, November 7-13, 1998 (Best Student Paper Finalist).
Keywords: runtime interaction, computational steering, matlab

[sc98b]
Jenifer L. Skidmore, Matthew J. Sottile, Janice E. Cuny, and Allen D. Malony, A Prototype Notebook-Based Environment for Computational Tools, Proceedings of Supercomputing '98, Orlando, FL, November 1998.
Keywords: electronic notebook, distributed computing, computational science,heterogeneous, tools, World Wide Web, collaboration

[scidac05]
P. Worley, J. Candy, L. Carrington, K. Huck, T. Kaiser, G. Mahinthakumar, A. Malony, S. Moore, D. Reed, P. Roth, H. Shan, S. Shende, A. Snavely, S. Sreepathi, F. Wolf, and Y. Zhang, "Performance Analysis of GYRO: A Tool Evaluation," Poster, Scientific Discovery through Advanced Computing Conference, (SciDAC 2005), 2005.
Keywords: Performance evaluation, PERC, TAU, SvPablo, Kojak, HPM, PMaC

[shmem14]
John C. Linford, Tyler A. Simon, Sameer Shende, Allen D. Malony: Profiling Non-numeric OpenSHMEM Applications with the TAU Performance System. OpenSHMEM 2014: 105-119
Keywords:

[shmem16]
Linford, J. C., Khuvis, S., Shende, S., Malony, A., Imam, N., & Venkata, M. G. (2016, August). Profiling Production OpenSHMEM Applications. In Workshop on OpenSHMEM and Related Technologies (pp. 219-224). Springer International Publishing.
Keywords:

[shpcc94]
Steven T. Hackstadt, Allen D. Malony, and Bernd Mohr, Scalable Performance Visualization for Data-Parallel Programs, Proc. of the Scalable High Performance Computing Conference (SHPCC), Knoxville, TN, May 1994, pp. 342-349. Also available as University of Oregon, Department of Computer and Information Science, Technical Report CIS-TR-94-09, March 1994.
Keywords: scalable performance visualization, scientific visualization, pC++, data-parallel programming

[sigmetrics87]
Daniel A. Reed, Allen D. Malony, Bradley D. McCredie, "Parallel Discrete Event Simulation: a Shared Memory Approach," Proc. 1987 ACM SIGMETRICS conference on Measurement and Modeling of Computer Systems, 15(1), pp. 36- 38, 1987.
Keywords: discrete event simulation

[sigmetrics95]
Allen D. Malony, "Data Interpretation and Experiment Planning in Performance Tools," Joint International Conference on Measurement and Modeling of Computer Systems, Proceedings of the 1995 ACM SIGMETRICS joint international conference on Measurement and Modeling of Computer Systems, pp. 62-63, 1995.
Keywords: performance measurement

[sp14]
Grigori Fursin, Renato Miceli, Anton Lokhmotov, Michael Gerndt, Marc Baboulin, Allen D. Malony, Zbigniew Chamski, Diego Novillo, Davide Del Vento: Collective mind: Towards practical and collaborative auto-tuning. Scientific Programming 22(4): 309-329 (2014)
Keywords: high performance computing, systematic auto-tuning, systematic benchmarking, big data driven optimization, modeling of computer behavior, performance prediction, collaborative knowledge management, public repository of knowledge, NoSQL repository, code and data sharing, specification sharing, collaborative experimentation, machine learning, data mining, multi-objective optimization, model driven optimization, agile development, plugin-based tuning, performance regression buildbot, open access publication model, reproducible research

[spdt96]
S. Shende, J. Cuny, L. Hansen, J. Kundu, S. McLaughry and O. Wolf, Event and State-Based Debugging in TAU: A Prototype, Proceedings of ACM SIGMETRICS Symposium on Parallel and Distributed Tools (SPDT '96), May, 1996, pp. 21-30.
Keywords: event-based debugging, state-based debugging, pC++, TAU, Ariadne

[spdt98a]
S. Shende, A. D. Malony, J. Cuny, K. Lindlan, P. Beckman and S. Karmesin, Portable Profiling and Tracing for Parallel Scientific Applications using C++, Proceedings of ACM SIGMETRICS Symposium on Parallel and Distributed Tools (SPDT '98), August, 1998, pp. 134-145.
Keywords: performance, profiling, tracing, C++, parallel, TAU

[spdt98b]
K. Lindlan, A. Malony, J. Cuny, S. Shende, and P. Beckman, An IL Converter and Program Database for Analysis Tools, Proceedings of ACM SIGMETRICS Symposium on Parallel and Distributed Tools (SPDT '98), August 1998, pp. 153.
Keywords: IL Analyzer, PDT, static analysis

[tools]
A. D. Malony, S. Shende, A. Morris, S. Biersdorff, W. Spear, K. A. Huck and A. Nataraj. "Evolution of a Parallel Performance System," Second International Workshop on Tools for High Performance Computing. July 2008
Keywords: TAU

[tools11a]
A. Knuepfer, C. Roessel, D. an Mey, S. Biersdorff, K. Diethelm, D. Eschweiler, M. Geimer, M. Gerndt, D. Lorenz, A. Malony, W. Nagel, Y. Oleynik, P. Philippen, P. Saviankou, D. Schmidl, S. Shende, R. Tshueter, M. Wagner, B. Wesarg, and F. Wolf, "Score-P: A Joint Performance Measurement Run-Time Infrastructure for Periscope, Scalasca, TAU, and Vampir," in Proc. of the 5th International Workshop on Parallel Tools for High Performance Computing, September 2011, ZIH, Dresden, piblished as book "Tools for High Performance Computing," Eds. H. Brunst, M. Muller, W. Nagel, M. Resch, pp. 79-92, Springer, 2011.
Keywords: Score-P, performance measurement, TAU, Vampir

[tools11b]
Allen Malony, Sameer Shende, Wyatt Spear, Chee Wai Lee, and Scott Biersdorff, "Advances in the TAU Performance System," in Proc. of the 5th International Workshop on Parallel Tools for High Performance Computing, September 2011, ZIH, Dresden, piblished as book "Tools for High Performance Computing," Eds. H. Brunst, M. Muller, W. Nagel, M. Resch, pp. 119-130, Springer, 2011.
Keywords: TAU, ParaProf, Performance instrumentation, measurement, analysis.

[ugc09]
W. Spear, S. Shende, A. Malony, R. Portillo, P. Teller, D. Cronk, S. Moore, D. Terpstra. Making Performance Analysis Tuning Part of the Software Development Cycle. UGC 2009, San Diego, CA, June 15-18, 2009.
Keywords: TAU, eclipse, CDT, PTP, SCALASCA, VampirTrace

[vis92]
J. E. Cuny, A. Hough, and J. Kundu. Logical Time in Visualizations Produced by Parallel Programs, Proceedings of Visualization '92, 1992, pp. 186-193.
Keywords: parallel, visualization, logical time

[visapp06]
Kai Li, Allen D. Malony, Don M. Tucker: Automatic brain mr image segmentation by relative thresholding and morphological image analysis. VISAPP (1) 2006: 354-364
Keywords: Segmentation, brain, MR, intensity inhomogeneity, relative thresholding, mathematical morphology, skeletonbased opening, geodesic opening, a priori knowledge, first-order logic.

[vpasc14]
Kevin A. Huck, Kristin Potter, Doug W. Jacobsen, Hank Childs, Allen D. Malony: Linking performance data into scientific visualization tools. VPA@SC 2014: 50-57
Keywords:

[works09]
Matthew J. Sottile, Geoffrey C. Hulette, Allen D. Malony: Workflow representation and runtime based on lazy functional streams. SC-WORKS 2009
Keywords:


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